FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002531326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002531326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences45307876
Sequences flagged as poor quality0
Sequence length16
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGG13029072.875674419167211No Hit
AAAAAAAAAAAAAAAA3272480.7222761888021412No Hit
CAAAAAAAAAAAAAAA1389340.3066442576120761No Hit
CCAAAAAAAAAAAAAA722590.15948441282041118No Hit
CTTTAGGGAAACTGCT517820.1142891800975177No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)