FastQCFastQC Report
Thu 23 Mar 2023
EGAF00002532051

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002532051
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46760110
Sequences flagged as poor quality0
Sequence length100
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGG522110.11165713682025127No Hit
CACCAGGTTGCCTAAGGAGGGGTGAACCGGCCCAGGTCGGAAACGGAGCA467620.10000404190665933No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)