FastQCFastQC Report
Mon 3 Apr 2023
EGAF00002532173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002532173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55102786
Sequences flagged as poor quality0
Sequence length100
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT1096950.19907341890117858No Hit
GGTGAACCGGCCCAGGTCGGAAACGGAGCAGGTCAAAACTCCCGTGCTGA878790.15948195432441475No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)