FastQCFastQC Report
Wed 28 Dec 2022
EGAF00002532191

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002532191
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences50951895
Sequences flagged as poor quality0
Sequence length100
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGAT851060.167032060338482No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGA835470.163972311530317No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)