FastQCFastQC Report
Wed 14 Sep 2022
EGAF00002536106

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002536106
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12334001
Sequences flagged as poor quality0
Sequence length35-165
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN215430.17466351753984777No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN140570.11396950592107136No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)