FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002536287

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002536287
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length76-151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCAGAGCACCAGAGCAAAGCCACTGGAGTCAGGTTAGGACATGCCCTA12.564102564102564No Hit
CTTCATCTGAGAGCACTCATCCAGAAGGCCCTGAGGAAGAAGAAAATCCT12.564102564102564No Hit
ATGTAATAATATTGTTTCCTAATATGATTTTTTCAAACTAAATATTTTTA12.564102564102564No Hit
CTATGACACTTAGTTTGTACTTAATTTGAAGTTTACAAAGCTCTTCTACC12.564102564102564No Hit
GCCTCCCACATGCCACCTAAGGGGCGCTCCCGGAACCGCCGCCCCTGCGG12.564102564102564No Hit
TCTCTGGACAACTCTTTCTTGAAGGTCTCCACGAAGCCATCGAGGCTCTC12.564102564102564No Hit
GCTGTGTACGCGACCAGTTGTGTTATTATCACTGGGGGCGGGTCCGCTCG12.564102564102564No Hit
CACCCACACTGAGTAGGGTGCATGCCGTGAGTGCTGTAATCAAGATTAAA12.564102564102564No Hit
ATGCTCACCTACGCAGCTCCTCTCGCCCCTGCAGCCCCGTCCACCACCAC12.564102564102564No Hit
ACACCAGGTTCCAGATTCAAGCCCTACTCCATGACAGCCACCTGGCCAGG12.564102564102564No Hit
AGCATGTACTACCCCAGCTGAGCCTTCAGATGACTGTGGCCCTCACCATC12.564102564102564No Hit
CCCTGGCACATGCCGACTGAAACAAGGGGCTTCATTTACCAGTTGTCCTG12.564102564102564No Hit
ATGCCAGGCAGGACGGGGTTGCCACGGCAGCTGCCTCACTCACCCCTGGC12.564102564102564No Hit
GTCACAGGTTACACAGATGCCAAGAGAACCCGGGTGGCCGCCAGCAGCGA12.564102564102564No Hit
GTGCATAGGAGCCTTCAGGCATTACCCTCTGTGACCCAGGCCCATCGATG12.564102564102564No Hit
GTCTTCTTCTACATCATCACAATTATCAGGGAAGTCCTCAAAATGGCTCA12.564102564102564No Hit
AGGCATGAGCCACCGCACCCGGCCCCATTTTCAGCTTTTTAAAGGATACA12.564102564102564No Hit
CCCCCTGAGCATTGTGGAAAAAACCCTGGTGGATGCTGTTGCTAAGCTTC12.564102564102564No Hit
ACGCAGTGGTTCTGCACTGAGGCCCTCGTCATGGTGGCGCCTGTGTGGTA12.564102564102564No Hit
AGAAAAAGCAGTGAAAACCTTGTTTGGTCTTCCAGTGGCAAGGATAGTTG12.564102564102564No Hit
ATGGAGAGGAACATAATTGATCTAATAGAGCTGAAAAACATACTATAAGA12.564102564102564No Hit
CCCTAGCATCTGCTGCAGAGGTCTCCTCTACAGCTCCCGTGTCTGGGAAG12.564102564102564No Hit
ACACAAGGGTGAGGATTTCATTTCACTTTCAAGCCAACCCACTGACTCCT12.564102564102564No Hit
ACTCAGGATATTAACTTCCAGAAGATCCTCTCAGTCTCCTCAGGAGTTGT12.564102564102564No Hit
ATCACCATCACTCCAGAAACAAGAAATGACAACTGAGAGGACTCACATCA12.564102564102564No Hit
GTACCATTTGCTGTTCACCAATATTCACTGTTCTGCAGCCTCCGCTGCTG12.564102564102564No Hit
AACAAGCACAGTTATTGTTTAACATTATGGATTTTAATTGTGTTGACACC12.564102564102564No Hit
GTGCAGACCGAATCAGAAGGAAGAGAGTCCTTCGTCCTACCTGCCACACC12.564102564102564No Hit
GCCCTTGACCTCTCTCGGCCAATTACCTTATGACTCAATTTGGCCATTCT12.564102564102564No Hit
GGGTAGTGGAGTGGGCGACAGATGGCCACATACCGGTCATAGGCCATGGC12.564102564102564No Hit
ACGCAGCTCTGCTCCCACAGCTCCTCCCTCACATCCACCGCATGGTGGCC12.564102564102564No Hit
GCCCTAGTTTGCCATTTGGAAAGCAGACTCCTAGGCATCATTGCTGTTTT12.564102564102564No Hit
GAGAAACCCTATAAATGTATGGAATGTGGAAAAAGTTACACACGAAGCTC12.564102564102564No Hit
TCAGAACTATCCTGCACCGGAAGGAGTTTTACTGCGACTCTAGCAAACAC12.564102564102564No Hit
CCTCCAGCATGCCCAGCCTCTGGACGGCTGCCTCCACTGTGGCCAGGCTG12.564102564102564No Hit
CCTTAACTCGGGAGGGCCGCGCTGAGGCTGGGAGCCGGAGATACGGCCCA12.564102564102564No Hit
CTCCAGGGCAGGAGAGGGGTTGAATCTCAGGCTGGAGGGTGAAGGCAGCT12.564102564102564No Hit
GCATCTTCCATGGCTCCCCAGAGCCCTCCAGATCAAGTTCAAGTACCTTG12.564102564102564No Hit
GGCTGGATTTTATAAGAAAAAATAATTAGTTGACAAATGAGGGTAGCAAT12.564102564102564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)