FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002536288

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002536288
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39
Sequences flagged as poor quality0
Sequence length1-151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGAACACCATGCAGTGGACCAGCTCCGCCAGCTGCTCCAGGCAGCTGG12.564102564102564No Hit
GGCAACACCTTGAGCAAAATAATTTTGCGATGAAAGAATGTATCCTTTAA12.564102564102564No Hit
GTTCTACGAAGCCTCCCCCTATGAGCCGGTGACCTCCCGCCTCTCGGACA12.564102564102564No Hit
CGTCTAAGCCACTGGCCCCACTTTTTCTGTTAGGAAAAGCCTACTTGAAA12.564102564102564No Hit
GTCTATATGTTTTATAGGCCTTTCCTGAGCGGTAAGAACAGGTCGCCAGT12.564102564102564No Hit
TCGTACACCACTCGCATGTCGGCGTCCACCACGGTGACGCGGGTCAGCTC12.564102564102564No Hit
AATCAATCCTTTTCTGTTATAGTAACTTTGAATTTCTCTTCCAGATGATA12.564102564102564No Hit
CCTCAAGGCCAAGGCCACATTCAAGGCTTCGGACTTCATTGATGCGCTTG12.564102564102564No Hit
CCAATGATGAACAAAACTGACCAACTTTTTTTTTAATCTCTGAAAAAACA12.564102564102564No Hit
CAAAACTCCGTTTCAAAAACAAAAAAAGGAAGAAAAGAAAAAGAAAAAAG12.564102564102564No Hit
GCGGAAGCCCCACCCGGCACACGACTAGCGCACGGACGCGCATGCGTCCC12.564102564102564No Hit
GTCCTCCCTCCTCCACCCCCAGTGTGTTTAGTTTTTGTTTTTAGCACTGG12.564102564102564No Hit
CTATAGGGTTTCTCCACTGATGGAGTTCTCTCAGCCTGTGTCACAGGGGA12.564102564102564No Hit
N12.564102564102564No Hit
CCTCCTGCAGGGTCTGCTGCCGTTGTGGCACCGAGTACCTGGTGTCCTCC12.564102564102564No Hit
GTCTTTGAGGAACTGTGGGCCAGCTGGCAGTGGGATGAGGCTGGCCCCCT12.564102564102564No Hit
GCCTATGAGTCGTGGAGTGCGTTTCCCAGGGTGCCCCACAGACCACCTTC12.564102564102564No Hit
GACGTACAGATGGGGTTTCGGTGTGGATGTCCTTTCTGTTTATTAGGTTT12.564102564102564No Hit
GCGCCCACCTGGCGCAGCACCAAGTCACGCACGGCGATCTGAGACCCCAG12.564102564102564No Hit
CATATCTTTTGAAAATATGAACTCCATAACTTCCTAGGAGTGAGATAGCA12.564102564102564No Hit
CTCTTCGGTGAACAGTTGGAGATAGCCTCGGCGGAGGACGGTGGGGACTT12.564102564102564No Hit
CTTTGTAAGTGACCTGGCCATTCTCCCTTCTGGCCCTTAACAATTTTCTT12.564102564102564No Hit
GCTCTTCCGGCTACAGACAGCACTCCAAGCCCAGAACCGCAGGCCCTTCC12.564102564102564No Hit
GACTTGTACTCACCAAGCAAGAATAGGAATCATTCAGTCTGTGATCCAAA12.564102564102564No Hit
AGCCTAAAGACTTCCTTGGGGCTAAATAGTGAAAAAAGCCATTTCACAAA12.564102564102564No Hit
CTGCTAGACAGCTTGGCATGGCCCTCGTGGTGGTGGACGGGGCTGCAGGG12.564102564102564No Hit
GCTACTGAGAACGAGAGCACTTCATGGATAATTTATTGCTCTGAGAATCA12.564102564102564No Hit
GGCATATACCTGTAAACTGATGGAATTGGCTAAAAATTGTGATAATAAGA12.564102564102564No Hit
GTGCTGCAGAGAGGAACCACAACCATCACAAACCTGGAAGGCTGGGTGGG12.564102564102564No Hit
GTAAAGAGCCTGGGAAAAAGGAAATATGGGAAAATCTAGGTCATGGACAG12.564102564102564No Hit
GCACAAGCCTATGTACTTCTTCCTGGCCAACCTGTCCTTCTTGGAGACCT12.564102564102564No Hit
GGGCTCCCGGGCCCCACAGACAAAAGCGCTTTTCCTTGGCATTCCGCATC12.564102564102564No Hit
CTCGGTGGGTGGTCTCTGCTGTCCCCTTTCAGCCATGACCCTGCTGCCCC12.564102564102564No Hit
GGCTCCTTCTGCAGCAAAAGGGGCTTAAGCAAAGGGGCCGCCAAGACTTT12.564102564102564No Hit
GATGTAAAATTATAATTGTCAGGATCTTATTCAGATGATCTTTTAAGGTT12.564102564102564No Hit
GTGTTCAGCTGTGCTGATGCCTGCCATTGGGTCCTCCTTAGGCCCTGTAA12.564102564102564No Hit
TATTTCTGGATAGCAGCACCTTTTCTGTTCTAGTGTCTTCATACAGTTTG12.564102564102564No Hit
GCCTCTGCCCACGAGGGTGCAGAGACTGAAGTGGAGCAGGCACTAGAGCA12.564102564102564No Hit
GCTAAGGGGGTGACGGTGAAGGATGGGGGGCAGGATGATATGCAAGTAAA12.564102564102564No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)