FastQCFastQC Report
Tue 13 Sep 2022
EGAF00002536734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002536734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6151802
Sequences flagged as poor quality0
Sequence length35-165
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN135450.22017938808823823No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN69110.11234106689389549No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)