FastQCFastQC Report
Sun 11 Sep 2022
EGAF00002537359

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002537359
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1972005
Sequences flagged as poor quality0
Sequence length35-165
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[FAIL]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN583192.9573454428360986No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)