Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002538405 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 8820158 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 49 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GAGATGAC | 2719239 | 30.829821869404157 | No Hit |
ACTTCATA | 2313169 | 26.22593608867324 | No Hit |
TGCCGTGG | 2221542 | 25.187099822928342 | No Hit |
CTAGACCT | 1402308 | 15.898898863262994 | No Hit |
CTAGCCCT | 34248 | 0.38829236392363947 | No Hit |
GAGATGCC | 19647 | 0.22275111171477882 | Illumina PCR Primer Index 3 (100% over 8bp) |
TGCCGTGA | 11196 | 0.12693650159101458 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)