Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002538576 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 10120651 |
Sequences flagged as poor quality | 0 |
Sequence length | 8 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GGACACGT | 3010108 | 29.742236937129835 | No Hit |
CCTGTGCG | 2765893 | 27.329200463487975 | No Hit |
TACTCTTC | 2284866 | 22.57627498468231 | No Hit |
ATGAGAAA | 1585947 | 15.670404996674622 | No Hit |
GGCCACGT | 77984 | 0.7705433178162155 | TruSeq Adapter, Index 20 (100% over 8bp) |
GGACCCGT | 38796 | 0.38333502459476176 | No Hit |
CCGGTGCG | 31194 | 0.3082212794414114 | No Hit |
CCTGGGCG | 26063 | 0.2575229597384595 | No Hit |
TACTCGTC | 19241 | 0.19011622868924144 | No Hit |
TACTGTTC | 19093 | 0.18865387216691892 | No Hit |
ATGAGAAC | 14163 | 0.139941590713878 | No Hit |
GGACACGG | 13219 | 0.1306141274904154 | No Hit |
CGTGTGCG | 12658 | 0.12507100580782798 | No Hit |
TACGCTTC | 10262 | 0.10139663940590382 | No Hit |
Adapter Content
Can't analyse adapters as read length is too short (12 vs 0)