FastQCFastQC Report
Mon 12 Sep 2022
EGAF00002538701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002538701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12749779
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGTCTTCCAGTTTTCCACTTCAAA151910.11914716325671215No Hit
ATACTAATCTCCCTACAAATCTCCTT130430.10229981241243476No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)