Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00002538766 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 11908662 |
Sequences flagged as poor quality | 0 |
Sequence length | 58 |
%GC | 46 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
AAGCAGTGGTATCAACGCAGAGTACATGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA | 58361 | 0.4900718485418429 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG | 37902 | 0.3182725313725421 | No Hit |
AAGCAGTGGTATCAACGCAGAGTACATGGGAGGCATTGAGGCAGCCAGCGCAGGGGCT | 13012 | 0.10926500391059886 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |
AAGCAGTGGTATCAACGCAGAGTACATGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA | 12655 | 0.10626718601972245 | Clontech SMARTer II A Oligonucleotide (100% over 25bp) |