FastQCFastQC Report
Thu 5 Jan 2023
EGAF00002539261

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002539261
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20798246
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCGGTATTTAGCCTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCC590800.28406241564793494No Hit
GCCCTCTTGAACTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTTACGGTA325620.1565612792540294No Hit
CTTAGATGGAGTTTACCACCCGCTTTGGGCTGCATTCCCAAGCAACCCGA231710.11140843319191436No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)