FastQCFastQC Report
Sun 14 May 2023
EGAF00002546544

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002546544
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26528219
Sequences flagged as poor quality0
Sequence length150
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAG352570.13290375806985008No Hit
CGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGG298700.11259708011306753No Hit
CGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTCCG289610.10917054024621857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)