FastQCFastQC Report
Thu 14 Sep 2023
EGAF00002546772

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002546772
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences34481732
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAGGGCGAGGCCCGCGGCGGCGCCGCCGCCGCCGCGCGCTTCCCTCCG644400.1868815638379186No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGA430970.12498502105404681No Hit
GTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT429560.12457610887991358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)