FastQCFastQC Report
Sat 13 May 2023
EGAF00002547064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002547064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28216874
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTACCATCTCGTATGC5774632.0465165631033404TruSeq Adapter, Index 8 (97% over 36bp)
TAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAG355840.1261089375102288No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)