FastQCFastQC Report
Wed 15 Feb 2023
EGAF00002553459

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002553459
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences119845467
Sequences flagged as poor quality0
Sequence length100
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4201380.35056645071106446No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)