FastQCFastQC Report
Thu 9 Feb 2023
EGAF00002553462

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002553462
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99567478
Sequences flagged as poor quality0
Sequence length100
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1080850.10855452219046866No Hit
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1001710.1006061437048752No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)