FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002557755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002557755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1617036
Sequences flagged as poor quality0
Sequence length31-151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGGAGTGGAAGAAACCCACGCATCTTCTCTCCCTTCCCACCTTCCCCA80500.4978244145461202No Hit
ATTTCCCAGGGCCTCTTACCCACTCCAGGCTGTCAGCAGGGATCTTGTGA58770.3634427433897575No Hit
TCACTGTCTCCAGCCATGCACACGCCGTGGAGCAGCACGAGATGCCGGTA54550.3373456125899485No Hit
CCTGATCGTGGTCCAGAGAGGTCACAGCCCACCCACATCATCCTTGGTTC47680.2948604731125343No Hit
GCTCTCACTGTCTCCAGCCATGCACACGCCGTGGAGCAGCACGAGATGCC26620.16462218528220768No Hit
GGGGAGACCAGGCATAGGGCAGTCAGGCTGCTGCAGGCAGGCCCCATGGC20630.12757910151660198No Hit
AATCAGTGAGGAATCAGAGGCCTGGGGACCCTGGGCAACCAGCCCTGTCG20210.12498175674505702No Hit
GAAGGTCAGGCACTGGCAAGTGATGTGGACTATCGCCATTACCTGCACCA19370.11978706720196705No Hit
CGTAGTCGCTGGCGCTATGCAAAAAAAAGAGAAGAGGAATAAGCCCATTC18350.11347922989964354No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)