FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002637473

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002637473
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences789436
Sequences flagged as poor quality0
Sequence length150
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC50800.6434973829417457No Hit
GCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGG46400.5877613891436418No Hit
CAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGG8950.11337207829387055No Hit
GCTGCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGC8380.10615173364275254No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)