FastQCFastQC Report
Sun 11 Sep 2022
EGAF00002637503

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002637503
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1464953
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGGAC84050.5737385431478006No Hit
GCAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGG81330.5551713945771639No Hit
CAGGTCGACCCGTGCGGAGGAGCGAGGAGGAAGGACGCGCGAGGGCCGGG20390.13918535270414817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)