FastQCFastQC Report
Fri 24 Mar 2023
EGAF00002638221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002638221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56663794
Sequences flagged as poor quality0
Sequence length150-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCGGAAGAGCACACGTCTGAACTCCAGTCACAGCGATAGATCTCGTATG1519940.2682383039864927TruSeq Adapter, Index 1 (97% over 35bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA583810.10303051715880515No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)