FastQCFastQC Report
Mon 5 Sep 2022
EGAF00002641419

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002641419
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18738810
Sequences flagged as poor quality0
Sequence length75
%GC51

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATATATGGCCGCGTCCTCGACTCTCAGGTAGTTCATCTGCAGATACAGAGTGTTCGTGGACTGGTCTCTGGA254790.13596914638656352No Hit
GTATAATAACTGGCCTCTCACTTTCGGCGGAGGGACCAGGCTGGAGATCAAACGAACTGTGGCTGCACCATCTGT244320.13038181186532122No Hit
GTCATAGGTGGTCAGGTCTGTGACCAGGCAGGTCAACTTGGTGGACTTGGTGAGGAAGATGCTGGCAAAGGATGG221710.11831594428888494No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)