FastQCFastQC Report
Mon 3 Apr 2023
EGAF00002737560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002737560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44050692
Sequences flagged as poor quality0
Sequence length1-91
%GC36

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1617830.36726551310476574No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)