FastQCFastQC Report
Sun 4 Sep 2022
EGAF00002796547

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002796547
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences931774
Sequences flagged as poor quality0
Sequence length251
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTATGAGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG23620.2534949461994003No Hit
GGTATGAGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG21430.2299913927626227No Hit
GGCACACGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG18150.1947897236883622No Hit
GGACACTGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG17030.18276964156544398No Hit
CGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG16240.17429119078231417No Hit
GGCACACGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG15960.1712861702515846No Hit
GGCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14670.1574416113778663No Hit
GGACACTGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14560.15626106759793684No Hit
GGTATGAGACTCAGCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA14530.15593910111250153No Hit
GCACACTGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14490.15550981246525444No Hit
CTTATGAGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14420.15475855733257207No Hit
GGACACTGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14320.15368533571445436No Hit
CGTATGAGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG14260.15304140274358374No Hit
GGGTATCGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG13820.14831922762386587No Hit
CGTATGAGATAAGCCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA13470.14456295196045393No Hit
GGACACTGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG13370.14348973034233622No Hit
CCTATGAGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG13230.14198722007697145No Hit
CGCACACGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG13050.1400554211643596No Hit
CATATGAGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12950.13898219954624189No Hit
GGCACACGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12850.1379089779281242No Hit
GCTATGAGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12760.13694307847181827No Hit
GGTATGAGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12580.13501127955920642No Hit
GTACACTGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12430.13340144713202987No Hit
GGTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG12370.13275751416115925No Hit
TGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11780.12642550661426483No Hit
GGACACTGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11770.12631818445245305No Hit
GGTATGAGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11530.1237424525689706No Hit
CGGTATCGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11470.12309851959809996No Hit
GTGTATCGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11450.12288387527447642No Hit
GCACACTGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11400.12234726446541758No Hit
CGCACACGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11350.12181065365635872No Hit
GTCACACGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11330.1215960093327352No Hit
GTCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11160.11977153258193511No Hit
GGGTATCGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11050.11859098880200564No Hit
GATATGAGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG11000.11805437799294678No Hit
CAACACTGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10980.11783973366932324No Hit
GCGTATCGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10930.1173031228602644No Hit
GGCACACGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10900.11698115637482909No Hit
GTACACTGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10840.11633722340395848No Hit
GCGTATCGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10840.11633722340395848No Hit
GTACACTGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10770.11558596827127608No Hit
GTCACACGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10770.11558596827127608No Hit
CGACACTGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10760.1154786461094643No Hit
CGGTATCGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10670.11451274665315839No Hit
TATATGAGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10610.11386881368228775No Hit
AGACACTGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10570.11343952503504069No Hit
CGCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10500.1126882699023583No Hit
CGACACTGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10470.112366303416923No Hit
GTGTATCGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10450.11215165909329945No Hit
GGACACTGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10330.11086379315155821No Hit
GGACACTGACAACTCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA10290.11043450450431112No Hit
TCTATGAGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10290.11043450450431112No Hit
CGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA10270.1102198601806876No Hit
CATATGAGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10270.1102198601806876No Hit
CGTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10240.10989789369525227No Hit
GCCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10200.10946860504800521No Hit
ATCACACGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10180.10925396072438166No Hit
GCGTATCGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10160.10903931640075812No Hit
GGCACACGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10150.10893199423894637No Hit
GTTATGAGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10120.10861002775351103No Hit
CCGTATCGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10080.10818073910626397No Hit
TGACACTGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG10050.10785877262082866No Hit
CGACACTGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9990.10721483964995804No Hit
GGCACACGAGGAATCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA9990.10721483964995804No Hit
GCGTATCGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9970.1070001953263345No Hit
GGCACACGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9910.10635626235546387No Hit
CCGTATCGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9900.10624894019365212No Hit
TGACACTGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9870.1059269737082168No Hit
GGACACTGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9860.10581965154640503No Hit
GTACACTGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9780.10496107425191088No Hit
AGCACACGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9780.10496107425191088No Hit
TGACACTGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9770.10485375209009909No Hit
CTTATGAGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9760.10474642992828734No Hit
GGTATGAGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9710.10420981911922848No Hit
TTACACTGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9690.10399517479560494No Hit
TGCACACGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9690.10399517479560494No Hit
GTACACTGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9660.10367320831016964No Hit
GACACACGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9650.10356588614835785No Hit
GGGTATCGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9640.1034585639865461No Hit
CGCACACGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9620.10324391966292255No Hit
GGTATGAGATGTTGCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA9600.10302927533929901No Hit
GGCACACGATAAGCCCAGGGTTTTCCCAGTCACGACCAGGAATCAGTCGA9590.10292195317748724No Hit
TGGTATCGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9570.1027073088538637No Hit
TGCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9550.10249266453024015No Hit
GTACACTGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9540.1023853423684284No Hit
TGGTATCGACTCAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9540.1023853423684284No Hit
CATATGAGAGGAATCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9510.1020633758829931No Hit
TGCACACGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9470.101634087235746No Hit
CCTATGAGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9450.10141944291212246No Hit
AGACACTGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9440.1013121207503107No Hit
GACACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9440.1013121207503107No Hit
CGCACACGATGTTGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9430.10120479858849891No Hit
GTTATGAGAAGGAGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9380.10066818777944007No Hit
AGTATGAGATGCACCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9360.10045354345581654No Hit
AGCACACGACGAGGCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9350.10034622129400476No Hit
CCGTATCGATAAGCCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9340.100238899132193No Hit
GGTATGAGACAACTCCAGGGTTTTCCCAGTCACGACAGGAATCAGCCCAG9330.10013157697038122No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)