FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797854

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797854
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57772
Sequences flagged as poor quality0
Sequence length35-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT800.13847538600013848No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG750.12982067437512984No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC630.10904936647510904No Hit
TTATGGTACCGTGCAATATTCATGGTGGCTGGCAGTAATGTACGAAATAC610.10558748182510559No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT600.10385653950010386No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA590.10212559717510213No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)