FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797856

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797856
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24690
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA370.14985824220332117No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGGGGCAGGAATCAAAGACAG330.1336573511543135No Hit
GTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAG280.11340623734305386No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT270.10935601458080195No Hit
GCTGAAGATGGCGGTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGG260.10530579181855002No Hit
GGTGAGAATAGTGTTAATGTCATTAAGGAGAGAATGAAGAGAAGTAAGCC260.10530579181855002No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT250.1012555690562981No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)