FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797881

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797881
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14056
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG230.16363118952760386No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA210.14940239043824702No Hit
ATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGG180.12805919180421174No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT180.12805919180421174No Hit
GCTGAAGATGGCGGTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGG170.1209447922595333No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC160.11383039271485487No Hit
CTTAAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC160.11383039271485487No Hit
GTTGAAATCTCCTAAGTGTAAGTTGGGTGCTTTGTGTTAAGCTACACTCT150.10671599317017644No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT150.10671599317017644No Hit
CGTAAAGACGTTAGGTCAAGGTGTAGCCCATGAGGTGGCAAGAAATGGGC150.10671599317017644No Hit
TTTGGGTACCACCCAAGTATTGACTCACCCATCAACAACCGCTATGTATT150.10671599317017644No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)