FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences88858
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTCTATCGATTACAGAACAGGCTCCTCTAGAGGGATATGAAGCACCGC1270.14292466632154674No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC1190.1339215377343627No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1160.13054536451416868No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1150.12941997344077066No Hit
CGATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATACCGCC1040.11704067163339262No Hit
GATAAACCCCGATCAACCTCACCACCTCTTGCTCAGCCTATATACCGCCA990.11141371626640258No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG920.10353597875261654No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)