FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797900

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797900
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12294
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA210.1708150317227916No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT190.15454693346347811No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC160.1301447860745079No Hit
CGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACA160.1301447860745079No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT160.1301447860745079No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA150.12201073694485115No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC130.10574263868553767No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)