FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797920

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797920
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31311
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACA430.13733192807639488No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT370.11816933346108396No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA360.11497556769186547No Hit
ATCTGAGGGGGGTCATCCATGGGGACGAGAAGGGATTTGACTGTAATGTG340.10858803615342852No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA320.10220050461499154No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC320.10220050461499154No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)