FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797921

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797921
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26866
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA450.16749795280279908No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT450.16749795280279908No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG410.15260924588699473No Hit
GTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAG330.12283183205538599No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT280.10422094841063052No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT280.10422094841063052No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC270.10049877168167945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)