FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797922

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797922
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26866
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT380.14144271570014144No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA350.13027618551328818No Hit
CGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAACTCACA300.11166530186853271No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG300.11166530186853271No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC280.10422094841063052No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG280.10422094841063052No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT270.10049877168167945No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT270.10049877168167945No Hit
ATTGAAGAGTATGCAATGAGCGATTTTAGGTCTGTTTGTCGTAGGCAGAT270.10049877168167945No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)