FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797926

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797926
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences39301
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTGAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC470.11958983231978831No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT460.11704536780234599No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAATGGGTGAGGGGTGACTTT430.10941197425001908No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA410.10432304521513448No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)