FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797928

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797928
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32500
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG590.18153846153846154No Hit
CTTGAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC540.16615384615384615No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN470.14461538461538462No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG450.13846153846153844No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT440.13538461538461538No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA430.13230769230769232No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAATGGGTGAGGGGTGACTTT360.11076923076923079No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC350.10769230769230768No Hit
GTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAA330.10153846153846155No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)