FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797929

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797929
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27629
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG510.18458865684606754No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA460.1664917297042962No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT400.1447754171341706No Hit
GTTAAGGGTGGGTAAGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT370.13391726084910782No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT350.12667848999239928No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC340.12305910456404502No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA300.10858156285062795No Hit
ACTGAGAGTAGAGTGCTTAGTTGAACAGGGCCCTGAAGCGCGTACACACC280.10134279199391943No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)