FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797948

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797948
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59143
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT830.14033782527095345No Hit
ATTGAACGTAGGTGCGATAAATAATGGGATGAGGCAGGAATCAAAGACAG710.12004801920768307No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC670.11328475051992629No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT630.10652148183216947No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG620.10483066466023029No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA600.10144903031635188No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)