FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797957

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797957
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17905
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATAGAATGAGGCAGGAATCAAAGACAG390.21781625244345154No Hit
TCTGAACACACAATAGCTAAGACCCAAACTGGGATTAGATACCCCACTAT240.13404077073443174No Hit
CTTGAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC230.12845573862049708No Hit
GCTGAAGATGGCGGTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGG210.11728567439262777No Hit
GTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAG200.1117006422786931No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC200.1117006422786931No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA190.10611561016475844No Hit
ATAAATAATAGAATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGG190.10611561016475844No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAATGGGTGAGGGGTGGCTTT190.10611561016475844No Hit
AGAAAATGTAGCCCATTTCTTGCCACCTCATGGGCTACACCTTGACCTAA180.10053057805082379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)