FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797958

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797958
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17905
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGAACGTAGGTGCGATAAATAATAGAATGAGGCAGGAATCAAAGACAG280.15638089919017034No Hit
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA220.12287070650656243No Hit
CTTGAAACTAGGCGGCTATGGTATAATACGCCTCACACTCATTCTCAACC220.12287070650656243No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA210.11728567439262777No Hit
GTTAAGGGTGGGTAGGTTTGTTGGTATCCTAATGGGTGAGGGGTGGCTTT210.11728567439262777No Hit
ATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATG200.1117006422786931No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC190.10611561016475844No Hit
AGTGAACTGTATCCGACATCTGGTTCCTACTTCAGGGTCATAAAGCCTAA180.10053057805082379No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)