FastQCFastQC Report
Fri 2 Sep 2022
EGAF00002797964

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797964
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences102384
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC1330.12990310986091577No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA1300.12697296452570714No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1280.12501953430223472No Hit
GTTAAGGGTAGGTAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT1080.10548523206751054No Hit
GACTACAACCACGACCAATGATATGAAAAACCATCGTTGTATTTCAACTA1060.10353180184403812No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG1040.10157837162056572No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)