FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15715
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCCACA190.12090359529112313No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT180.11454024817053769No Hit
ATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGG170.10817690104995227No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA160.10181355392936683No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)