FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797991

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797991
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23262
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT320.13756340813343648No Hit
GTACAGTACCATAAATACTTGACCACCTGTAGTACATAAAAACCCAATCC320.13756340813343648No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA300.12896569512509673No Hit
ATTGAACGTAGGTGCGATAAATAATGGGATGAGGCAGGAATCAAAGACAG280.12036798211675695No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC270.11606912561258705No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA240.10317255610007739No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)