FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002797993

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002797993
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16090
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA220.13673088875077688No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC220.13673088875077688No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT190.11808576755748912No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA190.11808576755748912No Hit
GATGAAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTCA190.11808576755748912No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG190.11808576755748912No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGGGGCAGGAATCAAAGACAG190.11808576755748912No Hit
GTTGAACAGGGCCCTGAAGCGCGTACACACCGCCCGTCACCCTCCTCAAG180.11187072715972653No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)