FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31676
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA560.1767899987372143No Hit
GTTGAGGGTGGATAGGTTTGTTGGTATCCTAGTGGGTGAGGGGTGGCTTT430.13574946331607526No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAG390.12312160626341709No Hit
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA360.11365071347392347No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT360.11365071347392347No Hit
ATCTGAGGGGGGTCATCCATGGGGACGAGAAGGGATTTGACTGTAATGTG350.11049374921075894No Hit
TAAAAACCCAATCCACATCAAAACCCCCTCCCCATGCTTACAAGCAAGTA340.1073367849475944No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG320.10102285642126531No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)