FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798026

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798026
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70133
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGTTATAATTTTTCATCT1140.1625483010850812No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG1100.15684485192420117No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG900.12832760611980093No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA850.12119829466870091No Hit
GCCCTATACTCCCTCTACATATTTACCACAACACAATGGGGCTCACTCAC820.11692070779804085No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA790.11264312092738084No Hit
ATATTATGCTTGGTTATAATTTTTCATCTTTCCCTTGCGGTACTATATCT740.10551380947628078No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC720.10266208489584078No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)