FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53148
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA650.12229999247384661No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG570.10724768570783473No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA550.10348460901633175No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)