FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28858
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATTGGGACAGACCTAGTTCAATGAATCTGAGGAGGCTACTCAGTAGACA390.13514450065839628No Hit
CTTGAGGAGGGTGACGGGCGGTGTGTACGCGCTTCAGGGCCCTGTTCAAC360.12474876983851965No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGGGGCAGGAATCAAAGACAG350.1212835262318941No Hit
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA290.10049206459214083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)