FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798064

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798064
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28858
Sequences flagged as poor quality0
Sequence length32-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGAATATTGTACGGTACCATAAATACTTGACCACCTGTAGTACATAA330.11435303901864301No Hit
ATTGAACGTAGGTGCGATAAATAATAGGATGGGGCAGGAATCAAAGACAG320.11088779541201746No Hit
ATAAATAATAGGATGGGGCAGGAATCAAAGACAGATACTGCGACATAGGG310.10742255180539192No Hit
GTAAAACCCAGCCCATGACCCCTAACAGGGGCCCTCTCAGCCCTCCTAAT310.10742255180539192No Hit
GTATAGGGGTTAGTCCTTGCTATATTATGCTTGGCTATAATTTTTCATCT290.10049206459214083No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)