FastQCFastQC Report
Thu 1 Sep 2022
EGAF00002798069

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00002798069
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65272
Sequences flagged as poor quality0
Sequence length32-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTTAACAGTACATAGTACATAAAGCCATTTACCGTACATAGCACATTA760.11643583772521142No Hit
CCCCAGGGTTGGTCAATTTCGTGCCAGCCACCGCGGTCACACGATTAACC750.11490378722882706No Hit
ATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATACTTGAG740.11337173673244269No Hit
GCCTATATACCGCCATCTTCAGCAAACCCTGATGAAGGCTACAAAGTAAG670.10264738325775216No Hit
TCCTTGTACTATCCCTATGAGGCATAATTATAACAAGCTCCATCTGCCTA660.10111533276136783No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)